Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmga1P17095 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmga1P17095 Rarb-207ENSMUST00000225921 2756 ntBASIC17.45■□□□□ 0.38
Hmga1P17095 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmga1P17095 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmga1P17095 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga1P17095 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hmga1P17095 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Hmga1P17095 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmga1P17095 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmga1P17095 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.43■□□□□ 0.38
Hmga1P17095 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga1P17095 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmga1P17095 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.42■□□□□ 0.38
Hmga1P17095 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Hmga1P17095 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga1P17095 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.41■□□□□ 0.38
Hmga1P17095 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Hmga1P17095 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.41■□□□□ 0.38
Hmga1P17095 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.41■□□□□ 0.38
Hmga1P17095 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmga1P17095 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga1P17095 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hmga1P17095 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hmga1P17095 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmga1P17095 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmga1P17095 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmga1P17095 Gm27742-201ENSMUST00000184667 60 ntBASIC17.4■□□□□ 0.38
Hmga1P17095 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Gm45328-201ENSMUST00000210942 917 ntBASIC17.4■□□□□ 0.38
Hmga1P17095 Gm18115-201ENSMUST00000221209 621 ntBASIC17.4■□□□□ 0.38
Hmga1P17095 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.4■□□□□ 0.38
Hmga1P17095 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hmga1P17095 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Hmga1P17095 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms