Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.93■□□□□ 0.46
Cd44P15379 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.93■□□□□ 0.46
Cd44P15379 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cd44P15379 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Cd44P15379 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.93■□□□□ 0.46
Cd44P15379 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.93■□□□□ 0.46
Cd44P15379 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Cd44P15379 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd44P15379 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.93■□□□□ 0.46
Cd44P15379 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.92■□□□□ 0.46
Cd44P15379 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cd44P15379 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Gm4974-201ENSMUST00000209974 875 ntBASIC17.92■□□□□ 0.46
Cd44P15379 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cd44P15379 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd44P15379 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cd44P15379 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
Cd44P15379 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cd44P15379 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.91■□□□□ 0.46
Cd44P15379 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Cd44P15379 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cd44P15379 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cd44P15379 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cd44P15379 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Cd44P15379 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.9■□□□□ 0.46
Cd44P15379 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Gm10517-202ENSMUST00000192970 758 ntBASIC17.9■□□□□ 0.46
Cd44P15379 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.9■□□□□ 0.46
Cd44P15379 Gm10602-201ENSMUST00000098239 609 ntBASIC17.9■□□□□ 0.46
Cd44P15379 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.9■□□□□ 0.46
Cd44P15379 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.9■□□□□ 0.46
Cd44P15379 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cd44P15379 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cd44P15379 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cd44P15379 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cd44P15379 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cd44P15379 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cd44P15379 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cd44P15379 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cd44P15379 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms