Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Msh3P13705 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh3P13705 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh3P13705 Gm30025-201ENSMUST00000218555 728 ntBASIC18.75■□□□□ 0.59
Msh3P13705 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Msh3P13705 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh3P13705 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Msh3P13705 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Msh3P13705 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.74■□□□□ 0.59
Msh3P13705 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.74■□□□□ 0.59
Msh3P13705 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Msh3P13705 Gm7370-201ENSMUST00000219471 767 ntBASIC18.74■□□□□ 0.59
Msh3P13705 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh3P13705 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh3P13705 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Msh3P13705 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.73■□□□□ 0.59
Msh3P13705 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msh3P13705 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.73■□□□□ 0.59
Msh3P13705 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.73■□□□□ 0.59
Msh3P13705 Gm11539-201ENSMUST00000119837 557 ntBASIC18.73■□□□□ 0.59
Msh3P13705 Gm13436-201ENSMUST00000120418 567 ntBASIC18.73■□□□□ 0.59
Msh3P13705 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.73■□□□□ 0.59
Msh3P13705 Gm18958-201ENSMUST00000174258 762 ntBASIC18.73■□□□□ 0.59
Msh3P13705 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Msh3P13705 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh3P13705 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.72■□□□□ 0.59
Msh3P13705 Gm13559-201ENSMUST00000120476 863 ntBASIC18.72■□□□□ 0.59
Msh3P13705 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.72■□□□□ 0.59
Msh3P13705 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Msh3P13705 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.72■□□□□ 0.59
Msh3P13705 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh3P13705 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Msh3P13705 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Msh3P13705 Haglr-201ENSMUST00000100000 2085 ntBASIC18.71■□□□□ 0.59
Msh3P13705 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Msh3P13705 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.71■□□□□ 0.59
Msh3P13705 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.71■□□□□ 0.59
Msh3P13705 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Msh3P13705 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Msh3P13705 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh3P13705 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Msh3P13705 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh3P13705 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh3P13705 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh3P13705 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.7■□□□□ 0.58
Msh3P13705 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.7■□□□□ 0.58
Msh3P13705 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.7■□□□□ 0.58
Msh3P13705 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms