Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cxcl1P12850 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl1P12850 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Gm15375-201ENSMUST00000119510 849 ntBASIC14.13□□□□□ -0.15
Cxcl1P12850 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 Gm26571-201ENSMUST00000181399 666 ntBASIC14.13□□□□□ -0.15
Cxcl1P12850 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.13□□□□□ -0.15
Cxcl1P12850 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl1P12850 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl1P12850 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl1P12850 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.12□□□□□ -0.15
Cxcl1P12850 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cxcl1P12850 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.12□□□□□ -0.15
Cxcl1P12850 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl1P12850 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cxcl1P12850 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl1P12850 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl1P12850 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cxcl1P12850 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cxcl1P12850 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms