Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col1a1P11087 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col1a1P11087 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col1a1P11087 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col1a1P11087 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Col1a1P11087 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Gm10060-201ENSMUST00000212002 111 ntBASIC19.94■□□□□ 0.78
Col1a1P11087 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.94■□□□□ 0.78
Col1a1P11087 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col1a1P11087 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.94■□□□□ 0.78
Col1a1P11087 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col1a1P11087 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Col1a1P11087 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.93■□□□□ 0.78
Col1a1P11087 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.93■□□□□ 0.78
Col1a1P11087 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.93■□□□□ 0.78
Col1a1P11087 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.93■□□□□ 0.78
Col1a1P11087 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Col1a1P11087 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Col1a1P11087 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col1a1P11087 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Gm12350-201ENSMUST00000121208 462 ntBASIC19.92■□□□□ 0.78
Col1a1P11087 Gm27867-201ENSMUST00000184778 125 ntBASIC19.92■□□□□ 0.78
Col1a1P11087 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.92■□□□□ 0.78
Col1a1P11087 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.92■□□□□ 0.78
Col1a1P11087 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.92■□□□□ 0.78
Col1a1P11087 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.92■□□□□ 0.78
Col1a1P11087 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.92■□□□□ 0.78
Col1a1P11087 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col1a1P11087 Mir5126-201ENSMUST00000175513 77 ntBASIC19.92■□□□□ 0.78
Col1a1P11087 Gm8000-201ENSMUST00000188378 592 ntBASIC19.92■□□□□ 0.78
Col1a1P11087 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col1a1P11087 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col1a1P11087 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col1a1P11087 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col1a1P11087 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col1a1P11087 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col1a1P11087 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Col1a1P11087 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Col1a1P11087 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.89■□□□□ 0.77
Col1a1P11087 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.89■□□□□ 0.77
Col1a1P11087 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.89■□□□□ 0.77
Col1a1P11087 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.89■□□□□ 0.77
Col1a1P11087 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col1a1P11087 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms