Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gap43P06837 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gap43P06837 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gap43P06837 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Gap43P06837 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Gap43P06837 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gap43P06837 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gap43P06837 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gap43P06837 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Gap43P06837 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gap43P06837 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gap43P06837 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Gap43P06837 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gap43P06837 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gap43P06837 Mir2861-201ENSMUST00000175539 82 ntBASIC17.58■□□□□ 0.4
Gap43P06837 Gm42778-201ENSMUST00000199644 553 ntBASIC17.58■□□□□ 0.4
Gap43P06837 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gap43P06837 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.57■□□□□ 0.4
Gap43P06837 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gap43P06837 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.57■□□□□ 0.4
Gap43P06837 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Gap43P06837 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.57■□□□□ 0.4
Gap43P06837 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gap43P06837 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gap43P06837 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.56■□□□□ 0.4
Gap43P06837 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gap43P06837 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.56■□□□□ 0.4
Gap43P06837 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gap43P06837 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gap43P06837 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Gap43P06837 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gap43P06837 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Gap43P06837 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.55■□□□□ 0.4
Gap43P06837 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gap43P06837 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms