Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.98■□□□□ 0.95
Col4a1P02463 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.98■□□□□ 0.95
Col4a1P02463 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Gm11452-201ENSMUST00000122376 690 ntBASIC20.98■□□□□ 0.95
Col4a1P02463 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.98■□□□□ 0.95
Col4a1P02463 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.98■□□□□ 0.95
Col4a1P02463 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.98■□□□□ 0.95
Col4a1P02463 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.97■□□□□ 0.95
Col4a1P02463 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.97■□□□□ 0.95
Col4a1P02463 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Gm28659-201ENSMUST00000188013 759 ntBASIC20.97■□□□□ 0.95
Col4a1P02463 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.97■□□□□ 0.95
Col4a1P02463 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.97■□□□□ 0.95
Col4a1P02463 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Col4a1P02463 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a1P02463 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Col4a1P02463 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Col4a1P02463 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col4a1P02463 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 Gm27867-201ENSMUST00000184778 125 ntBASIC20.96■□□□□ 0.95
Col4a1P02463 Gm29707-201ENSMUST00000196325 491 ntBASIC20.96■□□□□ 0.95
Col4a1P02463 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a1P02463 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.95■□□□□ 0.95
Col4a1P02463 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.95■□□□□ 0.94
Col4a1P02463 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Col4a1P02463 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.95■□□□□ 0.94
Col4a1P02463 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Col4a1P02463 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a1P02463 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Col4a1P02463 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col4a1P02463 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col4a1P02463 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Col4a1P02463 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a1P02463 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col4a1P02463 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.94■□□□□ 0.94
Col4a1P02463 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Gm15372-201ENSMUST00000120729 834 ntBASIC20.93■□□□□ 0.94
Col4a1P02463 Gm27525-201ENSMUST00000184465 107 ntBASIC20.93■□□□□ 0.94
Col4a1P02463 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Col4a1P02463 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.93■□□□□ 0.94
Col4a1P02463 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Col4a1P02463 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.93■□□□□ 0.94
Col4a1P02463 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a1P02463 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.92■□□□□ 0.94
Col4a1P02463 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Col4a1P02463 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.92■□□□□ 0.94
Col4a1P02463 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col4a1P02463 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a1P02463 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Col4a1P02463 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms