Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Gm29707-201ENSMUST00000196325 491 ntBASIC17.57■□□□□ 0.4
P01878 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01878 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
P01878 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.56■□□□□ 0.4
P01878 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.56■□□□□ 0.4
P01878 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.56■□□□□ 0.4
P01878 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.56■□□□□ 0.4
P01878 Gm27459-201ENSMUST00000184860 107 ntBASIC17.56■□□□□ 0.4
P01878 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
P01878 Gm18421-201ENSMUST00000204122 625 ntBASIC17.56■□□□□ 0.4
P01878 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.56■□□□□ 0.4
P01878 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.56■□□□□ 0.4
P01878 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
P01878 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
P01878 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
P01878 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01878 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
P01878 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.55■□□□□ 0.4
P01878 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
P01878 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01878 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
P01878 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.54■□□□□ 0.4
P01878 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
P01878 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.54■□□□□ 0.4
P01878 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01878 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
P01878 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.53■□□□□ 0.4
P01878 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
P01878 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
P01878 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P01878 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01878 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.53■□□□□ 0.4
P01878 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P01878 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P01878 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01878 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P01878 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
P01878 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.52■□□□□ 0.4
P01878 Gm44771-201ENSMUST00000206975 626 ntBASIC17.52■□□□□ 0.4
P01878 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.52■□□□□ 0.4
P01878 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.52■□□□□ 0.39
P01878 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.52■□□□□ 0.39
P01878 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01878 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01878 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01878 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
P01878 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01878 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.51■□□□□ 0.39
P01878 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
P01878 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01878 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms