Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.25■□□□□ 0.35
Sp1O89090 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.25■□□□□ 0.35
Sp1O89090 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sp1O89090 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sp1O89090 Gm37722-201ENSMUST00000193757 208 ntBASIC17.24■□□□□ 0.35
Sp1O89090 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.24■□□□□ 0.35
Sp1O89090 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Gm7367-201ENSMUST00000057611 492 ntBASIC17.24■□□□□ 0.35
Sp1O89090 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sp1O89090 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
Sp1O89090 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sp1O89090 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Sp1O89090 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp1O89090 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.24■□□□□ 0.35
Sp1O89090 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sp1O89090 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.23■□□□□ 0.35
Sp1O89090 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.23■□□□□ 0.35
Sp1O89090 Gm13186-201ENSMUST00000118031 316 ntBASIC17.23■□□□□ 0.35
Sp1O89090 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sp1O89090 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sp1O89090 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp1O89090 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Sp1O89090 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.22■□□□□ 0.35
Sp1O89090 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Gm29518-201ENSMUST00000190858 372 ntBASIC17.22■□□□□ 0.35
Sp1O89090 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sp1O89090 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.22■□□□□ 0.35
Sp1O89090 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sp1O89090 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sp1O89090 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.22■□□□□ 0.35
Sp1O89090 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp1O89090 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.21■□□□□ 0.35
Sp1O89090 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.21■□□□□ 0.35
Sp1O89090 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp1O89090 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sp1O89090 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms