Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Matn4O89029 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.11■□□□□ 0.17
Matn4O89029 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.11■□□□□ 0.17
Matn4O89029 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.11■□□□□ 0.17
Matn4O89029 Gm4974-201ENSMUST00000209974 875 ntBASIC16.11■□□□□ 0.17
Matn4O89029 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Matn4O89029 Gm18025-201ENSMUST00000221733 862 ntBASIC16.11■□□□□ 0.17
Matn4O89029 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Matn4O89029 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.11■□□□□ 0.17
Matn4O89029 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Matn4O89029 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Matn4O89029 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Matn4O89029 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Matn4O89029 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Matn4O89029 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Gm12896-201ENSMUST00000118430 226 ntBASIC16.1■□□□□ 0.17
Matn4O89029 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.1■□□□□ 0.17
Matn4O89029 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Matn4O89029 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.1■□□□□ 0.17
Matn4O89029 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Matn4O89029 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Matn4O89029 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Matn4O89029 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Matn4O89029 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Matn4O89029 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.09■□□□□ 0.17
Matn4O89029 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.09■□□□□ 0.17
Matn4O89029 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Matn4O89029 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Matn4O89029 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn4O89029 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn4O89029 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn4O89029 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Matn4O89029 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Gm13158-201ENSMUST00000122007 736 ntBASIC16.08■□□□□ 0.16
Matn4O89029 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.08■□□□□ 0.16
Matn4O89029 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Gm42545-201ENSMUST00000202755 922 ntBASIC16.08■□□□□ 0.16
Matn4O89029 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.08■□□□□ 0.16
Matn4O89029 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.08■□□□□ 0.16
Matn4O89029 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Matn4O89029 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Matn4O89029 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.07■□□□□ 0.16
Matn4O89029 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Matn4O89029 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Matn4O89029 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Matn4O89029 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms