Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.43■□□□□ 0.38
ShdO88834 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Gm37055-201ENSMUST00000191866 133 ntBASIC17.43■□□□□ 0.38
ShdO88834 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.43■□□□□ 0.38
ShdO88834 Gm21814-202ENSMUST00000203277 873 ntBASIC17.43■□□□□ 0.38
ShdO88834 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.43■□□□□ 0.38
ShdO88834 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ShdO88834 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ShdO88834 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Gm7791-201ENSMUST00000219066 539 ntBASIC17.42■□□□□ 0.38
ShdO88834 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ShdO88834 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ShdO88834 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.41■□□□□ 0.38
ShdO88834 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.41■□□□□ 0.38
ShdO88834 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ShdO88834 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ShdO88834 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ShdO88834 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ShdO88834 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.4■□□□□ 0.38
ShdO88834 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.4■□□□□ 0.38
ShdO88834 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.4■□□□□ 0.38
ShdO88834 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ShdO88834 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.39■□□□□ 0.38
ShdO88834 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
ShdO88834 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.39■□□□□ 0.37
ShdO88834 Gm5417-201ENSMUST00000079706 384 ntBASIC17.39■□□□□ 0.37
ShdO88834 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.39■□□□□ 0.37
ShdO88834 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ShdO88834 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ShdO88834 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms