Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Hcn3O88705 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Gm6211-202ENSMUST00000167849 925 ntBASIC16.35■□□□□ 0.21
Hcn3O88705 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.35■□□□□ 0.21
Hcn3O88705 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hcn3O88705 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn3O88705 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Hcn3O88705 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hcn3O88705 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.34■□□□□ 0.21
Hcn3O88705 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hcn3O88705 Gm10602-201ENSMUST00000098239 609 ntBASIC16.34■□□□□ 0.21
Hcn3O88705 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hcn3O88705 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn3O88705 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn3O88705 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn3O88705 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn3O88705 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn3O88705 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn3O88705 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Hcn3O88705 Gm29257-201ENSMUST00000186115 639 ntBASIC16.33■□□□□ 0.2
Hcn3O88705 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.33■□□□□ 0.2
Hcn3O88705 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hcn3O88705 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.33■□□□□ 0.2
Hcn3O88705 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn3O88705 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hcn3O88705 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.32■□□□□ 0.2
Hcn3O88705 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.32■□□□□ 0.2
Hcn3O88705 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hcn3O88705 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.32■□□□□ 0.2
Hcn3O88705 Gm29791-202ENSMUST00000207888 369 ntBASIC16.32■□□□□ 0.2
Hcn3O88705 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Hcn3O88705 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.32■□□□□ 0.2
Hcn3O88705 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn3O88705 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hcn3O88705 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn3O88705 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms