Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Gm13418-201ENSMUST00000119097 944 ntBASIC16.59■□□□□ 0.25
Cacna1hO88427 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.59■□□□□ 0.25
Cacna1hO88427 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1hO88427 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.58■□□□□ 0.25
Cacna1hO88427 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1hO88427 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1hO88427 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cacna1hO88427 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.58■□□□□ 0.24
Cacna1hO88427 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.58■□□□□ 0.24
Cacna1hO88427 Gm15590-201ENSMUST00000078419 552 ntBASIC16.58■□□□□ 0.24
Cacna1hO88427 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1hO88427 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cacna1hO88427 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.57■□□□□ 0.24
Cacna1hO88427 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.57■□□□□ 0.24
Cacna1hO88427 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cacna1hO88427 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cacna1hO88427 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1hO88427 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1hO88427 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.56■□□□□ 0.24
Cacna1hO88427 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.56■□□□□ 0.24
Cacna1hO88427 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.56■□□□□ 0.24
Cacna1hO88427 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.56■□□□□ 0.24
Cacna1hO88427 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cacna1hO88427 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.56■□□□□ 0.24
Cacna1hO88427 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.56■□□□□ 0.24
Cacna1hO88427 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.56■□□□□ 0.24
Cacna1hO88427 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1hO88427 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Gm13186-201ENSMUST00000118031 316 ntBASIC16.55■□□□□ 0.24
Cacna1hO88427 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.55■□□□□ 0.24
Cacna1hO88427 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cacna1hO88427 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1hO88427 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms