Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Gm27459-201ENSMUST00000184860 107 ntBASIC16.19■□□□□ 0.18
Tgfbr3O88393 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Grk6-206ENSMUST00000224995 2971 ntBASIC16.18■□□□□ 0.18
Tgfbr3O88393 Gm12895-201ENSMUST00000122214 226 ntBASIC16.18■□□□□ 0.18
Tgfbr3O88393 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Gm5864-201ENSMUST00000202263 970 ntBASIC16.18■□□□□ 0.18
Tgfbr3O88393 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tgfbr3O88393 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.17■□□□□ 0.18
Tgfbr3O88393 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.17■□□□□ 0.18
Tgfbr3O88393 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Tgfbr3O88393 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Tgfbr3O88393 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.16■□□□□ 0.18
Tgfbr3O88393 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tgfbr3O88393 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.16■□□□□ 0.18
Tgfbr3O88393 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tgfbr3O88393 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Mir8098-201ENSMUST00000184011 137 ntBASIC16.15■□□□□ 0.18
Tgfbr3O88393 Gm43347-201ENSMUST00000200226 580 ntBASIC16.15■□□□□ 0.18
Tgfbr3O88393 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tgfbr3O88393 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tgfbr3O88393 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Gm13884-201ENSMUST00000118103 829 ntBASIC16.14■□□□□ 0.17
Tgfbr3O88393 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms