Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pdlim1O70400 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.83■□□□□ 0.28
Pdlim1O70400 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Gm45058-201ENSMUST00000205810 766 ntBASIC16.83■□□□□ 0.28
Pdlim1O70400 Gm18959-201ENSMUST00000208954 655 ntBASIC16.83■□□□□ 0.28
Pdlim1O70400 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.83■□□□□ 0.28
Pdlim1O70400 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pdlim1O70400 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim1O70400 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.81■□□□□ 0.28
Pdlim1O70400 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim1O70400 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.81■□□□□ 0.28
Pdlim1O70400 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim1O70400 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Pdlim1O70400 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim1O70400 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim1O70400 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim1O70400 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
Pdlim1O70400 Gm7370-201ENSMUST00000219471 767 ntBASIC16.81■□□□□ 0.28
Pdlim1O70400 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.81■□□□□ 0.28
Pdlim1O70400 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pdlim1O70400 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Mir5130-201ENSMUST00000175160 84 ntBASIC16.8■□□□□ 0.28
Pdlim1O70400 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim1O70400 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim1O70400 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.79■□□□□ 0.28
Pdlim1O70400 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdlim1O70400 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pdlim1O70400 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.79■□□□□ 0.28
Pdlim1O70400 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.79■□□□□ 0.28
Pdlim1O70400 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pdlim1O70400 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim1O70400 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim1O70400 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim1O70400 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdlim1O70400 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim1O70400 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim1O70400 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms