Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.73□□□□□ -0.37
Rpl35aO55142 Gm43799-201ENSMUST00000201845 579 ntBASIC12.73□□□□□ -0.37
Rpl35aO55142 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Gm24841-201ENSMUST00000158676 357 ntBASIC12.72□□□□□ -0.37
Rpl35aO55142 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rpl35aO55142 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpl35aO55142 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.71□□□□□ -0.37
Rpl35aO55142 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.71□□□□□ -0.37
Rpl35aO55142 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.71□□□□□ -0.37
Rpl35aO55142 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpl35aO55142 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpl35aO55142 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpl35aO55142 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpl35aO55142 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rpl35aO55142 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpl35aO55142 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpl35aO55142 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm11539-201ENSMUST00000119837 557 ntBASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm13436-201ENSMUST00000120418 567 ntBASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm27463-201ENSMUST00000183569 57 ntBASIC12.7□□□□□ -0.38
Rpl35aO55142 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Gm9987-201ENSMUST00000069768 567 ntBASIC12.7□□□□□ -0.38
Rpl35aO55142 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rpl35aO55142 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms