Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SncaO55042 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Gm13148-201ENSMUST00000118892 745 ntBASIC14.15□□□□□ -0.14
SncaO55042 Mir2861-201ENSMUST00000175539 82 ntBASIC14.15□□□□□ -0.14
SncaO55042 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Gm5408-201ENSMUST00000197998 747 ntBASIC14.15□□□□□ -0.14
SncaO55042 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SncaO55042 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.15□□□□□ -0.14
SncaO55042 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SncaO55042 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.15□□□□□ -0.14
SncaO55042 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.14□□□□□ -0.15
SncaO55042 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
SncaO55042 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.14□□□□□ -0.15
SncaO55042 Gm27405-201ENSMUST00000184201 112 ntBASIC14.14□□□□□ -0.15
SncaO55042 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SncaO55042 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.14□□□□□ -0.15
SncaO55042 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SncaO55042 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.13□□□□□ -0.15
SncaO55042 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SncaO55042 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.13□□□□□ -0.15
SncaO55042 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SncaO55042 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.13□□□□□ -0.15
SncaO55042 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.13□□□□□ -0.15
SncaO55042 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SncaO55042 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SncaO55042 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SncaO55042 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SncaO55042 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SncaO55042 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SncaO55042 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SncaO55042 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Mir6349-201ENSMUST00000184059 97 ntBASIC14.12□□□□□ -0.15
SncaO55042 Gm2559-201ENSMUST00000201323 363 ntBASIC14.12□□□□□ -0.15
SncaO55042 Gm4968-201ENSMUST00000071458 858 ntBASIC14.12□□□□□ -0.15
SncaO55042 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.12□□□□□ -0.15
SncaO55042 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms