Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 AA414768-201ENSMUST00000121924 1257 ntBASIC17.31■□□□□ 0.36
Limk2O54785 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Limk2O54785 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.31■□□□□ 0.36
Limk2O54785 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Limk2O54785 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
Limk2O54785 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.3■□□□□ 0.36
Limk2O54785 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.3■□□□□ 0.36
Limk2O54785 Gm7791-201ENSMUST00000219066 539 ntBASIC17.3■□□□□ 0.36
Limk2O54785 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.3■□□□□ 0.36
Limk2O54785 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Limk2O54785 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Limk2O54785 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Limk2O54785 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.29■□□□□ 0.36
Limk2O54785 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.29■□□□□ 0.36
Limk2O54785 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.29■□□□□ 0.36
Limk2O54785 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Limk2O54785 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Limk2O54785 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Limk2O54785 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.28■□□□□ 0.36
Limk2O54785 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.28■□□□□ 0.36
Limk2O54785 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.28■□□□□ 0.36
Limk2O54785 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.28■□□□□ 0.36
Limk2O54785 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Limk2O54785 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Limk2O54785 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.27■□□□□ 0.36
Limk2O54785 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Limk2O54785 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.27■□□□□ 0.36
Limk2O54785 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Limk2O54785 Mir5130-201ENSMUST00000175160 84 ntBASIC17.27■□□□□ 0.36
Limk2O54785 Gm6345-202ENSMUST00000180900 204 ntBASIC17.27■□□□□ 0.36
Limk2O54785 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Limk2O54785 Gm2274-201ENSMUST00000184539 609 ntBASIC17.27■□□□□ 0.36
Limk2O54785 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.27■□□□□ 0.36
Limk2O54785 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Limk2O54785 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Limk2O54785 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Limk2O54785 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Limk2O54785 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.26■□□□□ 0.35
Limk2O54785 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Limk2O54785 Gm33142-201ENSMUST00000193913 867 ntBASIC17.26■□□□□ 0.35
Limk2O54785 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms