Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nr1i3O35627 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1i3O35627 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1i3O35627 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nr1i3O35627 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.32■□□□□ 0.52
Nr1i3O35627 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nr1i3O35627 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nr1i3O35627 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1i3O35627 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nr1i3O35627 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nr1i3O35627 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nr1i3O35627 Gm10698-201ENSMUST00000182663 604 ntBASIC18.31■□□□□ 0.52
Nr1i3O35627 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1i3O35627 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1i3O35627 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nr1i3O35627 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1i3O35627 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Nr1i3O35627 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.3■□□□□ 0.52
Nr1i3O35627 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1i3O35627 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.29■□□□□ 0.52
Nr1i3O35627 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.29■□□□□ 0.52
Nr1i3O35627 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nr1i3O35627 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.29■□□□□ 0.52
Nr1i3O35627 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Gm9731-201ENSMUST00000209480 747 ntBASIC18.29■□□□□ 0.52
Nr1i3O35627 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nr1i3O35627 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1i3O35627 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.28■□□□□ 0.52
Nr1i3O35627 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nr1i3O35627 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1i3O35627 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms