Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.67■□□□□ 0.26
Npc1O35604 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.67■□□□□ 0.26
Npc1O35604 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.67■□□□□ 0.26
Npc1O35604 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Npc1O35604 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.67■□□□□ 0.26
Npc1O35604 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Npc1O35604 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Npc1O35604 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Npc1O35604 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Gm9731-201ENSMUST00000209480 747 ntBASIC16.66■□□□□ 0.26
Npc1O35604 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.66■□□□□ 0.26
Npc1O35604 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Npc1O35604 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.66■□□□□ 0.26
Npc1O35604 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Npc1O35604 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Npc1O35604 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Npc1O35604 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.65■□□□□ 0.26
Npc1O35604 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.65■□□□□ 0.26
Npc1O35604 Gm7889-201ENSMUST00000185591 958 ntBASIC16.65■□□□□ 0.26
Npc1O35604 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Gm18959-201ENSMUST00000208954 655 ntBASIC16.65■□□□□ 0.26
Npc1O35604 Il3ra-202ENSMUST00000223589 738 ntBASIC16.65■□□□□ 0.26
Npc1O35604 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Npc1O35604 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.65■□□□□ 0.26
Npc1O35604 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Npc1O35604 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Npc1O35604 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Npc1O35604 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Npc1O35604 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.64■□□□□ 0.25
Npc1O35604 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Gm7977-201ENSMUST00000193787 748 ntBASIC16.64■□□□□ 0.25
Npc1O35604 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Npc1O35604 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Npc1O35604 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Npc1O35604 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Npc1O35604 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Npc1O35604 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.64■□□□□ 0.25
Npc1O35604 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Npc1O35604 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Npc1O35604 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Gm13474-201ENSMUST00000122466 815 ntBASIC16.63■□□□□ 0.25
Npc1O35604 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.63■□□□□ 0.25
Npc1O35604 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Gm17661-201ENSMUST00000170317 270 ntBASIC16.63■□□□□ 0.25
Npc1O35604 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Gm10231-201ENSMUST00000181584 441 ntBASIC16.63■□□□□ 0.25
Npc1O35604 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Gm10175-202ENSMUST00000208752 441 ntBASIC16.63■□□□□ 0.25
Npc1O35604 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Npc1O35604 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms