Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca4O35600 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca4O35600 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Abca4O35600 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca4O35600 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca4O35600 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Abca4O35600 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.02■□□□□ 0.15
Abca4O35600 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.02■□□□□ 0.15
Abca4O35600 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca4O35600 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Abca4O35600 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Abca4O35600 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.02■□□□□ 0.15
Abca4O35600 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Abca4O35600 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.02■□□□□ 0.15
Abca4O35600 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Abca4O35600 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.01■□□□□ 0.15
Abca4O35600 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Abca4O35600 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.01■□□□□ 0.15
Abca4O35600 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Mir7023-201ENSMUST00000185093 64 ntBASIC16.01■□□□□ 0.15
Abca4O35600 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.01■□□□□ 0.15
Abca4O35600 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.01■□□□□ 0.15
Abca4O35600 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Abca4O35600 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.01■□□□□ 0.15
Abca4O35600 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Abca4O35600 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16■□□□□ 0.15
Abca4O35600 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16■□□□□ 0.15
Abca4O35600 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16■□□□□ 0.15
Abca4O35600 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16■□□□□ 0.15
Abca4O35600 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16■□□□□ 0.15
Abca4O35600 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16■□□□□ 0.15
Abca4O35600 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16■□□□□ 0.15
Abca4O35600 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16■□□□□ 0.15
Abca4O35600 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16■□□□□ 0.15
Abca4O35600 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16■□□□□ 0.15
Abca4O35600 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16■□□□□ 0.15
Abca4O35600 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Abca4O35600 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.99■□□□□ 0.15
Abca4O35600 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Abca4O35600 Gm11780-201ENSMUST00000136880 516 ntBASIC15.99■□□□□ 0.15
Abca4O35600 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Abca4O35600 Gm5312-201ENSMUST00000203728 547 ntBASIC15.99■□□□□ 0.15
Abca4O35600 Gm7506-201ENSMUST00000207758 815 ntBASIC15.99■□□□□ 0.15
Abca4O35600 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.99■□□□□ 0.15
Abca4O35600 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Abca4O35600 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Abca4O35600 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.98■□□□□ 0.15
Abca4O35600 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Gm13418-201ENSMUST00000119097 944 ntBASIC15.98■□□□□ 0.15
Abca4O35600 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.98■□□□□ 0.15
Abca4O35600 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Abca4O35600 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Abca4O35600 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.97■□□□□ 0.15
Abca4O35600 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.97■□□□□ 0.15
Abca4O35600 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Abca4O35600 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms