Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.02■□□□□ 0.16
Cx3cl1O35188 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cx3cl1O35188 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cx3cl1O35188 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm11539-201ENSMUST00000119837 557 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm13436-201ENSMUST00000120418 567 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm17661-201ENSMUST00000170317 270 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm43799-201ENSMUST00000201845 579 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm9731-201ENSMUST00000209480 747 ntBASIC16.01■□□□□ 0.15
Cx3cl1O35188 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cx3cl1O35188 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cx3cl1O35188 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Cx3cl1O35188 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16■□□□□ 0.15
Cx3cl1O35188 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cx3cl1O35188 Gm13559-201ENSMUST00000120476 863 ntBASIC16■□□□□ 0.15
Cx3cl1O35188 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cx3cl1O35188 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cx3cl1O35188 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cx3cl1O35188 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cx3cl1O35188 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.99■□□□□ 0.15
Cx3cl1O35188 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cx3cl1O35188 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Gm7791-201ENSMUST00000219066 539 ntBASIC15.98■□□□□ 0.15
Cx3cl1O35188 Il3ra-202ENSMUST00000223589 738 ntBASIC15.98■□□□□ 0.15
Cx3cl1O35188 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cx3cl1O35188 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cx3cl1O35188 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms