Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
OtpO09113 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
OtpO09113 Gm10517-202ENSMUST00000192970 758 ntBASIC15.22■□□□□ 0.03
OtpO09113 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
OtpO09113 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
OtpO09113 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
OtpO09113 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
OtpO09113 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
OtpO09113 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.21■□□□□ 0.03
OtpO09113 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
OtpO09113 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.21■□□□□ 0.03
OtpO09113 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
OtpO09113 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
OtpO09113 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.2■□□□□ 0.02
OtpO09113 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.2■□□□□ 0.02
OtpO09113 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
OtpO09113 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.2■□□□□ 0.02
OtpO09113 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Gm5643-201ENSMUST00000117081 966 ntBASIC15.2■□□□□ 0.02
OtpO09113 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.2■□□□□ 0.02
OtpO09113 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Gm18666-201ENSMUST00000190039 958 ntBASIC15.2■□□□□ 0.02
OtpO09113 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
OtpO09113 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
OtpO09113 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.2■□□□□ 0.02
OtpO09113 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.2■□□□□ 0.02
OtpO09113 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
OtpO09113 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
OtpO09113 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
OtpO09113 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
OtpO09113 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.19■□□□□ 0.02
OtpO09113 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
OtpO09113 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
OtpO09113 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OtpO09113 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.18■□□□□ 0.02
OtpO09113 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.18■□□□□ 0.02
OtpO09113 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.18■□□□□ 0.02
OtpO09113 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.18■□□□□ 0.02
OtpO09113 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OtpO09113 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
OtpO09113 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.17■□□□□ 0.02
OtpO09113 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms