Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hdac1O09106 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.32■□□□□ 0.84
Hdac1O09106 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.32■□□□□ 0.84
Hdac1O09106 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.32■□□□□ 0.84
Hdac1O09106 Gm24841-201ENSMUST00000158676 357 ntBASIC20.32■□□□□ 0.84
Hdac1O09106 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hdac1O09106 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac1O09106 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Hdac1O09106 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac1O09106 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Hdac1O09106 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.31■□□□□ 0.84
Hdac1O09106 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.31■□□□□ 0.84
Hdac1O09106 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Hdac1O09106 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.31■□□□□ 0.84
Hdac1O09106 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.31■□□□□ 0.84
Hdac1O09106 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.31■□□□□ 0.84
Hdac1O09106 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.31■□□□□ 0.84
Hdac1O09106 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac1O09106 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hdac1O09106 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.3■□□□□ 0.84
Hdac1O09106 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.3■□□□□ 0.84
Hdac1O09106 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.3■□□□□ 0.84
Hdac1O09106 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Hdac1O09106 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hdac1O09106 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.3■□□□□ 0.84
Hdac1O09106 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.3■□□□□ 0.84
Hdac1O09106 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hdac1O09106 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac1O09106 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac1O09106 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.29■□□□□ 0.84
Hdac1O09106 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.29■□□□□ 0.84
Hdac1O09106 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.29■□□□□ 0.84
Hdac1O09106 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.29■□□□□ 0.84
Hdac1O09106 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hdac1O09106 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hdac1O09106 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac1O09106 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hdac1O09106 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac1O09106 Gm10517-202ENSMUST00000192970 758 ntBASIC20.28■□□□□ 0.84
Hdac1O09106 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.28■□□□□ 0.84
Hdac1O09106 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms