Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2b3O09039 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sh2b3O09039 Gm38027-201ENSMUST00000192315 235 ntBASIC15.18■□□□□ 0.02
Sh2b3O09039 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2b3O09039 Gm7367-201ENSMUST00000057611 492 ntBASIC15.18■□□□□ 0.02
Sh2b3O09039 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2b3O09039 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sh2b3O09039 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh2b3O09039 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.17■□□□□ 0.02
Sh2b3O09039 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.17■□□□□ 0.02
Sh2b3O09039 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh2b3O09039 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh2b3O09039 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh2b3O09039 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Mir8112-201ENSMUST00000184382 131 ntBASIC15.17■□□□□ 0.02
Sh2b3O09039 Gm2274-201ENSMUST00000184539 609 ntBASIC15.17■□□□□ 0.02
Sh2b3O09039 Gm45058-201ENSMUST00000205810 766 ntBASIC15.17■□□□□ 0.02
Sh2b3O09039 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2b3O09039 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Gm10013-201ENSMUST00000106074 672 ntBASIC15.16■□□□□ 0.02
Sh2b3O09039 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.16■□□□□ 0.02
Sh2b3O09039 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Gm4974-201ENSMUST00000209974 875 ntBASIC15.16■□□□□ 0.02
Sh2b3O09039 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.16■□□□□ 0.02
Sh2b3O09039 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2b3O09039 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Sh2b3O09039 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sh2b3O09039 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh2b3O09039 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Mir5130-201ENSMUST00000175160 84 ntBASIC15.15■□□□□ 0.02
Sh2b3O09039 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.15■□□□□ 0.02
Sh2b3O09039 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.15■□□□□ 0.02
Sh2b3O09039 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2b3O09039 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms