Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Gm27742-201ENSMUST00000184667 60 ntBASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Gm18669-201ENSMUST00000216049 778 ntBASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim34bJ3QNR8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gm13186-201ENSMUST00000118031 316 ntBASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gm11336-201ENSMUST00000118168 334 ntBASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gm28033-201ENSMUST00000184224 96 ntBASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim34bJ3QNR8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim34bJ3QNR8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
Trim34bJ3QNR8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Mir3081-201ENSMUST00000175305 84 ntBASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Gm17971-201ENSMUST00000190239 806 ntBASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim34bJ3QNR8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim34bJ3QNR8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms