Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Zfp264-201ENSMUST00000208656 1563 ntBASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc180J3QNE4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc180J3QNE4 Mir5126-201ENSMUST00000175513 77 ntBASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc180J3QNE4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC31■■■□□ 2.55
Ccdc180J3QNE4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC31■■■□□ 2.55
Ccdc180J3QNE4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc180J3QNE4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Gm5864-201ENSMUST00000202263 970 ntBASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Gm6443-201ENSMUST00000203599 874 ntBASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC30.98■■■□□ 2.55
Ccdc180J3QNE4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Gm7935-201ENSMUST00000100555 1278 ntBASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Gm9449-201ENSMUST00000207265 1011 ntBASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Gm8969-201ENSMUST00000199694 526 ntBASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc180J3QNE4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc180J3QNE4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC30.95■■■□□ 2.55
Ccdc180J3QNE4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC30.95■■■□□ 2.55
Ccdc180J3QNE4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc180J3QNE4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc180J3QNE4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ccdc180J3QNE4 Gm2651-201ENSMUST00000203560 838 ntBASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc180J3QNE4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ccdc180J3QNE4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms