Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh9F8VPK8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Gm24841-201ENSMUST00000158676 357 ntBASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh9F8VPK8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh9F8VPK8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Pcdh9F8VPK8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh9F8VPK8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh9F8VPK8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms