Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc188F6WEU2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Gm11025-201ENSMUST00000140773 466 ntBASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Gm8396-201ENSMUST00000057361 823 ntBASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc188F6WEU2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc188F6WEU2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc188F6WEU2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc188F6WEU2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc188F6WEU2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms