Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.49■□□□□ 0.87
Ube4aE9Q735 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Gm29707-201ENSMUST00000196325 491 ntBASIC20.49■□□□□ 0.87
Ube4aE9Q735 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube4aE9Q735 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ube4aE9Q735 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.48■□□□□ 0.87
Ube4aE9Q735 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.48■□□□□ 0.87
Ube4aE9Q735 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube4aE9Q735 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ube4aE9Q735 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.47■□□□□ 0.87
Ube4aE9Q735 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube4aE9Q735 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube4aE9Q735 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ube4aE9Q735 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ube4aE9Q735 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.45■□□□□ 0.87
Ube4aE9Q735 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Ube4aE9Q735 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.45■□□□□ 0.86
Ube4aE9Q735 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Gm24589-201ENSMUST00000116692 94 ntBASIC20.45■□□□□ 0.86
Ube4aE9Q735 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Gm34391-201ENSMUST00000203706 907 ntBASIC20.45■□□□□ 0.86
Ube4aE9Q735 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube4aE9Q735 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.45■□□□□ 0.86
Ube4aE9Q735 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Gm18421-201ENSMUST00000204122 625 ntBASIC20.44■□□□□ 0.86
Ube4aE9Q735 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.44■□□□□ 0.86
Ube4aE9Q735 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube4aE9Q735 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.43■□□□□ 0.86
Ube4aE9Q735 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.43■□□□□ 0.86
Ube4aE9Q735 Birc2-201ENSMUST00000054878 378 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms