Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc85cE9Q6B2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Gm4535-201ENSMUST00000182274 558 ntBASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 AV026068-213ENSMUST00000223675 1171 ntBASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Gm10355-201ENSMUST00000097146 517 ntBASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc85cE9Q6B2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.02■□□□□ 0.96
Ccdc85cE9Q6B2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Gm27000-201ENSMUST00000182943 842 ntBASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc85cE9Q6B2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Gm14701-201ENSMUST00000117156 348 ntBASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Gm25745-201ENSMUST00000174945 133 ntBASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Chchd1-203ENSMUST00000224633 557 ntBASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc85cE9Q6B2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Gm13036-201ENSMUST00000117799 748 ntBASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Gm6550-201ENSMUST00000187574 993 ntBASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc85cE9Q6B2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Golph3-205ENSMUST00000228671 2842 ntBASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc85cE9Q6B2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccdc85cE9Q6B2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms