Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb9E9Q5G2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb9E9Q5G2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb9E9Q5G2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb9E9Q5G2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Gm13186-201ENSMUST00000118031 316 ntBASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb9E9Q5G2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms