Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54bE9PXC0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Gm11950-201ENSMUST00000121615 838 ntBASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54bE9PXC0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Gm37722-201ENSMUST00000193757 208 ntBASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.77■□□□□ 0.28
Srp54bE9PXC0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54bE9PXC0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Gm6623-201ENSMUST00000173570 544 ntBASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Gm27741-201ENSMUST00000185060 237 ntBASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.76■□□□□ 0.27
Srp54bE9PXC0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.75■□□□□ 0.27
Srp54bE9PXC0 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Srp54bE9PXC0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Mir770-201ENSMUST00000103252 94 ntBASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srp54bE9PXC0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms