Protein–RNA interactions for Protein: D3YXK1

Samd1, Atherin, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd1D3YXK1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samd1D3YXK1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samd1D3YXK1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.41■□□□□ 0.7
Samd1D3YXK1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.41■□□□□ 0.7
Samd1D3YXK1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samd1D3YXK1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samd1D3YXK1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samd1D3YXK1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samd1D3YXK1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samd1D3YXK1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samd1D3YXK1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samd1D3YXK1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.39■□□□□ 0.69
Samd1D3YXK1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.39■□□□□ 0.69
Samd1D3YXK1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.39■□□□□ 0.69
Samd1D3YXK1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samd1D3YXK1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Gm10698-201ENSMUST00000182663 604 ntBASIC19.38■□□□□ 0.69
Samd1D3YXK1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samd1D3YXK1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Samd1D3YXK1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Samd1D3YXK1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samd1D3YXK1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Samd1D3YXK1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms