Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Gm17661-201ENSMUST00000170317 270 ntBASIC18.08■□□□□ 0.48
Rfx8D3YU81 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.08■□□□□ 0.48
Rfx8D3YU81 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Gm5417-201ENSMUST00000079706 384 ntBASIC18.08■□□□□ 0.48
Rfx8D3YU81 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx8D3YU81 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.07■□□□□ 0.48
Rfx8D3YU81 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.07■□□□□ 0.48
Rfx8D3YU81 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx8D3YU81 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Gm7638-201ENSMUST00000121348 967 ntBASIC18.06■□□□□ 0.48
Rfx8D3YU81 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Gm27463-201ENSMUST00000183569 57 ntBASIC18.06■□□□□ 0.48
Rfx8D3YU81 Gm9731-201ENSMUST00000209480 747 ntBASIC18.06■□□□□ 0.48
Rfx8D3YU81 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx8D3YU81 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.05■□□□□ 0.48
Rfx8D3YU81 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfx8D3YU81 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.05■□□□□ 0.48
Rfx8D3YU81 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rfx8D3YU81 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms