Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Mir8098-201ENSMUST00000184011 137 ntBASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn2B2RVW2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn2B2RVW2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn2B2RVW2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Clrn2B2RVW2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Gm11452-201ENSMUST00000122376 690 ntBASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn2B2RVW2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.69■□□□□ 0.74
Clrn2B2RVW2 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn2B2RVW2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn2B2RVW2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms