Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.95■□□□□ 0.78
Usp42B2RQC2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp42B2RQC2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp42B2RQC2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Usp42B2RQC2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp42B2RQC2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Usp42B2RQC2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.93■□□□□ 0.78
Usp42B2RQC2 Gm45058-201ENSMUST00000205810 766 ntBASIC19.93■□□□□ 0.78
Usp42B2RQC2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp42B2RQC2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.92■□□□□ 0.78
Usp42B2RQC2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp42B2RQC2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Gm13474-201ENSMUST00000122466 815 ntBASIC19.91■□□□□ 0.78
Usp42B2RQC2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Gm18959-201ENSMUST00000208954 655 ntBASIC19.91■□□□□ 0.78
Usp42B2RQC2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.91■□□□□ 0.78
Usp42B2RQC2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp42B2RQC2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp42B2RQC2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.89■□□□□ 0.78
Usp42B2RQC2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Usp42B2RQC2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp42B2RQC2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.89■□□□□ 0.77
Usp42B2RQC2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp42B2RQC2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Mir5130-201ENSMUST00000175160 84 ntBASIC19.88■□□□□ 0.77
Usp42B2RQC2 Gm9987-201ENSMUST00000069768 567 ntBASIC19.88■□□□□ 0.77
Usp42B2RQC2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp42B2RQC2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms