Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Gm18032-201ENSMUST00000222541 538 ntBASIC25.41■■□□□ 1.66
Ube2uB1AUC4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ube2uB1AUC4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Gm43272-201ENSMUST00000200599 1584 ntBASIC25.4■■□□□ 1.66
Ube2uB1AUC4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Gm13474-201ENSMUST00000122466 815 ntBASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Mir8112-201ENSMUST00000184382 131 ntBASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ube2uB1AUC4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Gm7370-201ENSMUST00000219471 767 ntBASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ube2uB1AUC4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
Ube2uB1AUC4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 AC134329.2-201ENSMUST00000217897 428 ntBASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC25.38■■□□□ 1.65
Ube2uB1AUC4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm42939-201ENSMUST00000197514 2205 ntBASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm19721-201ENSMUST00000195284 1764 ntBASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm6728-201ENSMUST00000178117 1065 ntBASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Il3ra-202ENSMUST00000223589 738 ntBASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ube2uB1AUC4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Gm37648-201ENSMUST00000192072 2563 ntBASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Spsb2-203ENSMUST00000112473 1322 ntBASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ube2uB1AUC4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ube2uB1AUC4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms