Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm15590-201ENSMUST00000078419 552 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Gm13418-201ENSMUST00000119097 944 ntBASIC12.87□□□□□ -0.35
Col6a5A6H584 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a5A6H584 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a5A6H584 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.86□□□□□ -0.35
Col6a5A6H584 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.86□□□□□ -0.35
Col6a5A6H584 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.86□□□□□ -0.35
Col6a5A6H584 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Gm11764-201ENSMUST00000120221 623 ntBASIC12.86□□□□□ -0.35
Col6a5A6H584 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a5A6H584 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a5A6H584 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.85□□□□□ -0.35
Col6a5A6H584 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a5A6H584 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a5A6H584 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col6a5A6H584 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col6a5A6H584 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a5A6H584 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a5A6H584 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a5A6H584 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms