Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Gm44771-201ENSMUST00000206975 626 ntBASIC19.8■□□□□ 0.76
Chd5A2A8L1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Chd5A2A8L1 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.8■□□□□ 0.76
Chd5A2A8L1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.79■□□□□ 0.76
Chd5A2A8L1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd5A2A8L1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.78■□□□□ 0.76
Chd5A2A8L1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.78■□□□□ 0.76
Chd5A2A8L1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.78■□□□□ 0.76
Chd5A2A8L1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.78■□□□□ 0.76
Chd5A2A8L1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chd5A2A8L1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd5A2A8L1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.76■□□□□ 0.75
Chd5A2A8L1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd5A2A8L1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Rprl3-201ENSMUST00000157400 290 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Mir8098-201ENSMUST00000184011 137 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44357-201ENSMUST00000195897 142 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm19658-201ENSMUST00000196231 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44367-201ENSMUST00000196836 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44350-201ENSMUST00000197197 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44390-201ENSMUST00000197533 144 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44313-201ENSMUST00000198018 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44486-201ENSMUST00000198508 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44454-201ENSMUST00000198541 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44314-201ENSMUST00000199263 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44394-201ENSMUST00000199558 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44484-201ENSMUST00000199873 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm43347-201ENSMUST00000200226 580 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44466-201ENSMUST00000200264 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Gm44359-201ENSMUST00000200671 138 ntBASIC19.75■□□□□ 0.75
Chd5A2A8L1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd5A2A8L1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Chd5A2A8L1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.74■□□□□ 0.75
Chd5A2A8L1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms