Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 Gm12382-201ENSMUST00000122005 922 ntBASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc112A0AUP1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc112A0AUP1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc112A0AUP1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Gm24841-201ENSMUST00000158676 357 ntBASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Gm18666-201ENSMUST00000190039 958 ntBASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc112A0AUP1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc112A0AUP1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc112A0AUP1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms