Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv1-88A0A140T8N1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm42642-201ENSMUST00000200683 355 ntBASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv1-88A0A140T8N1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv1-88A0A140T8N1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv1-88A0A140T8N1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Gm6365-201ENSMUST00000054711 744 ntBASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv1-88A0A140T8N1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms