Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Gm10418-201ENSMUST00000100943 576 ntBASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap99A0A140LIX9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Gm7638-201ENSMUST00000121348 967 ntBASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Gm17661-201ENSMUST00000170317 270 ntBASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap99A0A140LIX9 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Gm7284-201ENSMUST00000131667 944 ntBASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cfap99A0A140LIX9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Gm27389-201ENSMUST00000183622 195 ntBASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap99A0A140LIX9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Gm24841-201ENSMUST00000158676 357 ntBASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Gm7791-201ENSMUST00000219066 539 ntBASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap99A0A140LIX9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms