Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.32■□□□□ 0.84
Frmpd3A0A140LIW3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frmpd3A0A140LIW3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Gm9727-201ENSMUST00000161387 555 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Gm25745-201ENSMUST00000174945 133 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Gm4535-201ENSMUST00000182274 558 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Gm10355-201ENSMUST00000097146 517 ntBASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.31■□□□□ 0.84
Frmpd3A0A140LIW3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Gm10576-201ENSMUST00000191927 825 ntBASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frmpd3A0A140LIW3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Frmpd3A0A140LIW3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Gm27397-201ENSMUST00000184997 107 ntBASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Gm15590-201ENSMUST00000078419 552 ntBASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Fst-202ENSMUST00000223640 2612 ntBASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Frmpd3A0A140LIW3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Gm13418-201ENSMUST00000119097 944 ntBASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Frmpd3A0A140LIW3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Frmpd3A0A140LIW3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Frmpd3A0A140LIW3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms