Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Gm12382-201ENSMUST00000122005 922 ntBASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Gm18666-201ENSMUST00000190039 958 ntBASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Gm42545-201ENSMUST00000202755 922 ntBASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Gm12441-201ENSMUST00000121806 588 ntBASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc194A0A140LIT1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Gm20049-201ENSMUST00000219950 730 ntBASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc194A0A140LIT1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Gm4974-201ENSMUST00000209974 875 ntBASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc194A0A140LIT1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc194A0A140LIT1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Ccdc194A0A140LIT1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.96■□□□□ 0.3
Ccdc194A0A140LIT1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc194A0A140LIT1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc194A0A140LIT1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms