Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm6433-201ENSMUST00000118634 875 ntBASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm29791-202ENSMUST00000207888 369 ntBASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm4974-201ENSMUST00000209974 875 ntBASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm13436-201ENSMUST00000120418 567 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms