Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm8969-201ENSMUST00000199694 526 ntBASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trbv13-1A0A0B4J1P8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms