Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm37025-201ENSMUST00000195159 829 ntBASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm7638-201ENSMUST00000121348 967 ntBASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mir6982-201ENSMUST00000184354 68 ntBASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm21814-202ENSMUST00000203277 873 ntBASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-4A0A0B4J1K2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm9731-201ENSMUST00000209480 747 ntBASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm30025-201ENSMUST00000218555 728 ntBASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms