Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Gm45417-201ENSMUST00000209533 758 ntBASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv20A0A0B4J1H5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv20A0A0B4J1H5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trbv20A0A0B4J1H5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Mir2861-201ENSMUST00000175539 82 ntBASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv20A0A0B4J1H5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv20A0A0B4J1H5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms