Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Haglr-201ENSMUST00000100000 2085 ntBASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm13401-201ENSMUST00000117074 291 ntBASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv4-78A0A0A6YYE5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Gm26571-201ENSMUST00000181399 666 ntBASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-78A0A0A6YYE5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms